CDS

Accession Number TCMCG011C14301
gbkey CDS
Protein Id XP_021898717.1
Location complement(join(1272354..1273258,1273619..1275674))
Gene LOC110815306
GeneID 110815306
Organism Carica papaya

Protein

Length 986aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA264084
db_source XM_022043025.1
Definition phytochrome A [Carica papaya]

EGGNOG-MAPPER Annotation

COG_category K
Description Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K12120        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04712        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004672        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007602        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009581        [VIEW IN EMBL-EBI]
GO:0009582        [VIEW IN EMBL-EBI]
GO:0009583        [VIEW IN EMBL-EBI]
GO:0009585        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009637        [VIEW IN EMBL-EBI]
GO:0009638        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009640        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009881        [VIEW IN EMBL-EBI]
GO:0009883        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010018        [VIEW IN EMBL-EBI]
GO:0010114        [VIEW IN EMBL-EBI]
GO:0010161        [VIEW IN EMBL-EBI]
GO:0010201        [VIEW IN EMBL-EBI]
GO:0010203        [VIEW IN EMBL-EBI]
GO:0010218        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031516        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046685        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055122        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0071490        [VIEW IN EMBL-EBI]
GO:0071491        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTTCTTCGAGGCCAGGCCACTCCTCCACCAATTCAGGGAGGTCAAGACACAGTGCCAGGATTATTGCTCAAACCACTGTAGATGCAAAACTTCATGCAGATTTTGAAGAATCTGGTAGTTCGTTTGATTACTCAAACTCAGTGCGCGTTACCAGCTCAGTTGAAGGAGACCAGCAGCCAAGATCCGACAAAGTTACAACTGCTTATCTCCATCACATACAGAAAGGCAAGCTGATCCAGCCATTCGGTTGCTTGCTAGCCTTGGATGAGAAAACTTTCAAGGTCATTGCATATAGCGAGAATGCTCCGGAACTGTTGACAATGGTTAGTCATGCAGTTCCTAGTGTCGGAGACCACCCAGTTCTTGGCATTGGAAGCGACATAAGGACTATTTTTACTGCCCCTAGTGCCTCTGCATTGCAAAAGGCACTGGGATTTGCTGACGTTTCTCTTCTGAACCCTGTTCTGGTGCACTGCAAGACTTCTGGAAAGCCTTTCTATGCAATTGTCCATCGGGTGACAGGGAGCTTGATTGTTGACTTTGAACCTGTGAAACCCTATGAAGTACCAATGACTGCTGCTGGTGCCCTGCAGTCATACAAGCTTGCGGCAAAAGCAATCACTCGATTGCAATCTTTACCTAGTGGGAGTATGGAAAGGCTTTGTGATACAATGGTTCAGGAGGTTTTTGAACTCACTGGATATGACAGGGTGATGGCCTATAAATTTCATGATGATGATCATGGTGAAGTGGTTTCTGAGATTACAAAGCCAGGCTTGGAGCCATATTTAGGTTTGCATTATCCAGCCACTGATATCCCCCAGGCAGCTCGCTTCTTGTTCATGAAGAATAAGGTCCGGATGATTGTTGATTGTCATGCAAAACATGTCAAGGTGCTTCAGGATGAAAAGCTTCCATTTGATCTAACCTTGTGCGGTTCAACACTAAGAGCTCCACATAGTTGCCATTTACAGTATATGGAAAACATGAATTCCATTGCATCTCTGGTAATGGCAGTTGTGGTTAATGAGGGAGATGAGGAGAGTGATGGTCCTAATTCTGCACAAATGCAAAAGAGAAAGAGACTCTGGGGTTTAGTAGTCTGCCATAACACAAGTCCGAGGTTTGTCCCATTCCCTCTCAGGTATGCCTGTGAGTTTCTAGTTCAAGTCTTTGCCATACATGTCAATAAGGAATTAGAGTTGGAGAATCAAATTACTGAGAAGAATATTTTGCGTACACAGACCCTCTTGTGTGATATGCTGATGAGGGATGCACCTTTGGGTATTGTATCGCAGAGTCCAAACATAATGGATCTTGTAAAATGTGATGGTGCTGCCCTATTGTACAAAAACAAAATATGGAGGTTAGGAATAACTCCAAGTGACTTGCAGCTGAATGAGATAGCTTCGTGGCTTTCTGACTACCATATGGATTCCACTGGCTTGAGTACAGATAGCTTGTATGATGCCGGGTTCCCAGGTGCTCTTGCCCTAGGTGATGTTGTATGTGGAATGGCTGCGGTGAGGATAACTTCCAAGGACATGATTTTTTGGTTTCGATCTCATACTGCAGCAGAAATTAGATGGGGTGGGGCAAAACATGAACCTGGTGAAAAAGATGATGGTCGGAAGATGCACCCAAGGTCATCATTCAAGGCTTTCCTTGAAGTTGTCAAGACAAGGAGTTTACCTTGGAAGGACTATGAAATGGATGCTATCCATTCTTTGCAGCTTATACTGAGGAATGCTTTTAAAGATAGTGAAACTGTGGATGTAAATGCCAAAACAATTCATTCAAAGCTTGGAGACCTCAAATTAGAAGGAATGCAAGAACTAGAAGCTGTGACAAGTGAGATGGTCCGTCTAATTGAAACAGCCACTGTTCCCATTTTAGCAGTTGACATTGATGGCCTTGTTAATGGATGGAATAGTAAAATTGCTGACTTAACTGGGCTTCCTGTTGATAGAGCAATTGGAAAGCATTTACTCACGCATGTGGAAGATTCTTCAGTTGACACAGTAAAAAAGATGTTACACATGGCACTGCAAGGCAAAGAGGAACAGAATGTCCAATTTCAGATCAAGACACATGGATCCAGAATTGATGAAGGCCCTATCAGTTTAGTAGTAAATGCTTGTGCAAGCAGGGACCTTCATGAGAATGTCGTGGGGGTGTGTTTTGTGGCCCAAGATATCACTGGTCAGAAGACTGTCATGGATAAGTTCACTAGGATTGAAGGTGATTACAAAGCCATTGTGCAGAATCCAAACCCTTTGATCCCCCCCATTTTTGGTACAGATGAATTTGGTTGGTGCTCTGAGTGGAACCCAGCAATGACAAAGTTAACTGGTTGGAAGCGAGAAGAAGTAGTAGACAAGATGATTTTGGGGGAGGTTTTTGGGATTCAGATGGCATGTTGCCGTCTTAAGAATCAGGAGGCTTTTGTAAATCTTGGTGTTGTGCTTAATAATGCAATGGCTGGTCAGGAAGCAGAGAAGGTTTCTTTTGGTTTTTTTACAAGAGGTGGAAAGTATGTGGAATGCTTGTTGTGTGTAAATAAGAAATTGGATAGGGAGGGTGCAGTCACCGGTGTCTTTTGCTTCCTGCAGCTTGCAAGCCAAGAGCTGCAACATGCACTCCATGTCCAGCGCTTGTCAGAGCAGACTGCTATGAAGAGATTGAAAGCCTTAGGTTATATAAAAAGACAGATCAGGAATCCGGTATCTGGGATCATATTTTCTAGAAAAATGATGGAGGGCACTGAATTGGGCCCAGAACAAAGACGGCTTCTTCATACCAGTGCTCAGTGTCAGCGCCAGCTCAACAAGATACTTGATGACTCAGATCTTGATAGCATTATTGAAGGGTATGACCAAATCCTTTCTTTAAAGACAAATTCCTGGTCGATTTACATCAAACAATTTTATGCACTTATTTGGAAAACTACCTGTTAG
Protein:  
MSSSRPGHSSTNSGRSRHSARIIAQTTVDAKLHADFEESGSSFDYSNSVRVTSSVEGDQQPRSDKVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVSHAVPSVGDHPVLGIGSDIRTIFTAPSASALQKALGFADVSLLNPVLVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNEGDEESDGPNSAQMQKRKRLWGLVVCHNTSPRFVPFPLRYACEFLVQVFAIHVNKELELENQITEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKIWRLGITPSDLQLNEIASWLSDYHMDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITSKDMIFWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETVDVNAKTIHSKLGDLKLEGMQELEAVTSEMVRLIETATVPILAVDIDGLVNGWNSKIADLTGLPVDRAIGKHLLTHVEDSSVDTVKKMLHMALQGKEEQNVQFQIKTHGSRIDEGPISLVVNACASRDLHENVVGVCFVAQDITGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMTKLTGWKREEVVDKMILGEVFGIQMACCRLKNQEAFVNLGVVLNNAMAGQEAEKVSFGFFTRGGKYVECLLCVNKKLDREGAVTGVFCFLQLASQELQHALHVQRLSEQTAMKRLKALGYIKRQIRNPVSGIIFSRKMMEGTELGPEQRRLLHTSAQCQRQLNKILDDSDLDSIIEGYDQILSLKTNSWSIYIKQFYALIWKTTC